NCT-503 chemical structure
Chemical structureResearch use only
CAT. NO. DC10486Featured

NCT-503

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Product overview

Description & Application

NCT-503 is a PHGDH inhibitor for studying serine synthesis, one-carbon metabolism and metabolic dependencies in cancer models. Published studies distinguish biochemical inhibition from cellular growth effects and document context-dependent off-target activity.

ParameterValue
Chemical NameN-(4,6-dimethylpyridin-2-yl)-4-(4-(trifluoromethyl)benzyl)piperazine-1-carbothioamide
CAS No.1916571-90-8
SynonymsNCT 503,NCT503
FormulaC20H23F3N4S
M.Wt408.48
SMILESS=C(N1CCN(CC2=CC=C(C(F)(F)F)C=C2)CC1)NC3=NC(C)=CC(C)=C3
Purity>98%
Storage2 years -20°C Powder, 2 weeks 4°C in DMSO, 6 months -80°C in DMSO
PHGDH · Literature evidence

Biological Activity & Performance

EndpointModel / sourceReported finding
Biochemical potencyPHGDH enzyme assay; Table 1 [1]IC50 2.5 ± 0.6 µM; n = 4. This is an enzyme-assay value, not a cellular IC50.
MechanismCompetition and dilution experiments; Fig. 1 [1]Reversible inhibition; noncompetitive with 3-phosphoglycerate and NAD+.
Cellular responseFive PHGDH-dependent cell lines; Fig. 3 [1]Growth/viability EC50 8–16 µM. MDA-MB-231 was less sensitive; responses differed across models.
Target engagementGlucose tracing in breast cancer cells; Fig. 2 [1]Reduced glucose-derived serine labeling supported pathway inhibition.
Animal activityBreast cancer xenografts; Fig. 3 [1]Reduced growth and weight of PHGDH-dependent MDA-MB-468 tumors; the PHGDH-independent MDA-MB-231 model did not show the same response.

How to interpret the evidence

Use PHGDH expression and pathway readouts to interpret cellular results. Independent work found altered glucose-carbon entry into the TCA cycle in PHGDH-knockout neuroblastoma cells, demonstrating an off-target effect [2]. A viability response alone does not establish PHGDH dependence.

Study figures

References

  1. Pacold ME, et al. A PHGDH inhibitor reveals coordination of serine synthesis and one-carbon unit fate. Nature Chemical Biology 12, 452–458 (2016).
  2. Inhibiting PHGDH with NCT-503 reroutes glucose-derived carbons into the TCA cycle, independently of its on-target effect. Scientific Reports (2021).

Product documentation

Refer to the certificate supplied with your lot for batch-specific release results.

Handling guide

2 years -20°C Powder, 2 weeks 4°C in DMSO, 6 months -80°C in DMSO

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